getMarkerSeqs-methods: Get sequences by marker.

Description Usage Arguments Value See Also

Description

Get sequences by marker.

Usage

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getMarkerSeqs(cross.info, markers = NULL)

## S4 method for signature 'CrossInfo'
getMarkerSeqs(cross.info, markers = NULL)

Arguments

cross.info

A CrossInfo object.

markers

Vector indicating markers to consider. This may be a logical vector of markers, an integer vector of marker indices, or a character vector that contains marker IDs or their equivalent syntactically valid name. If none are specified, results are returned for all markers.

Value

Vector of sequences corresponding to the given markers. Returns NULL if no sequence-marker information is available.

See Also

Other CrossInfo methods: getAlleles, getCrosstype, getGenotypes, getMarkerIndices, getMarkerNames, getMarkers, getNumMarkers, getNumPhenotypes, getNumSamples, getNumSeqs, getPhenotypeIndices, getPhenotypeNames, getPhenotypes, getSampleIndices, getSampleNames, getSamples, getSeqIndices, getSeqMarkers, getSeqNames, getSequences, getStrainIndices, getTetradIndices, hasMarkerSeqs, hasSampleIDs, hasStrainIndices, hasTetradIndices, setAlleles, setCrosstype, setGenotypes, setMarkerSeqs, setMarkers, setPhenotypes, setSamples, setSequences, setStrainIndices, setTetradIndices


gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.