makeEnumGenoMatrix: Make enumerated genotype matrix from genotype data.
In gact/shmootl: QTL Analysis Utilities for Yeast
Description
Usage
Arguments
Value
Description
Given input sample genotype data, this function creates an enumerated genotype
matrix, in which each the genotype data at each locus are coded as numbers
in order of occurrence. So for example, if the first sample at a locus has
raw genotype 'A', and the second sample has raw genotype 'C',
these will be assigned genotypes '1' and '2', respectively.
The enumeration of genotypes is performed independently for each locus,
so a given enumerated genotype does not have the same meaning across loci.
Usage
1
Arguments
x
Raw sample genotype array.
Value
An enumerated genotype matrix, with genotypes encoded as integers and
their corresponding genotype symbols in the attribute 'genotypes'.
gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.
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Description Usage Arguments Value
Description
Given input sample genotype data, this function creates an enumerated genotype
matrix, in which each the genotype data at each locus are coded as numbers
in order of occurrence. So for example, if the first sample at a locus has
raw genotype 'A', and the second sample has raw genotype 'C',
these will be assigned genotypes '1' and '2', respectively.
The enumeration of genotypes is performed independently for each locus,
so a given enumerated genotype does not have the same meaning across loci.
Usage
1 |
Arguments
x |
Raw sample genotype |
Value
An enumerated genotype matrix, with genotypes encoded as integers and
their corresponding genotype symbols in the attribute 'genotypes'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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