testQTLPeakSignificance: Test if QTL peaks are significant.
In gact/shmootl: QTL Analysis Utilities for Yeast
Description
Usage
Arguments
Value
Description
Given an object containing a LOD profile and a mapframe of QTL peaks,
this function tests which peaks are significant with respect to the specified
LOD threshold.
Usage
1
testQTLPeakSignificance(x, threshold, qtl.peaks, ...)
Arguments
x
A scanone object.
threshold
A single numeric LOD significance threshold, or an
object (e.g. summary.scanoneperm) containing one such threshold
and its associated significance level.
qtl.peaks
Locus mapframe containing QTL peaks.
...
Further arguments. These are passed to getLODProfile,
and may include a lodcolumn for a scanone object with multiple
LOD columns, or a qtl.index for a qtl object with multiple QTLs.
Value
Logical vector indicating which QTL peaks are significant.
gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Given an object containing a LOD profile and a mapframe of QTL peaks,
this function tests which peaks are significant with respect to the specified
LOD threshold.
Usage
1 | testQTLPeakSignificance(x, threshold, qtl.peaks, ...)
|
Arguments
x |
A |
threshold |
A single |
qtl.peaks |
Locus |
... |
Further arguments. These are passed to |
Value
Logical vector indicating which QTL peaks are significant.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.