get_lod_col_indices: Get LOD column indices.

In gact/utl: Utility Functions for R/qtl Analysis

Description

Get LOD column indices.

Usage

get_lod_col_indices(x, lodcolumns = NULL, strict = FALSE)

## S3 method for class 'scanone'
get_lod_col_indices(x, lodcolumns = NULL, strict = FALSE)

## S3 method for class 'scanoneperm'
get_lod_col_indices(x, lodcolumns = NULL, strict = FALSE)

## S3 method for class 'summary.scanoneperm'
get_lod_col_indices(x, lodcolumns = NULL, strict = FALSE)

Arguments

x	An R/qtl scanone, scanoneperm, or summary.scanoneperm object.
lodcolumns	This parameter indicates for which LOD columns indices should be returned. The specified LOD columns must be a character vector of LOD column names, a logical vector with length equal to the number of LOD columns, or a numeric vector of indices with respect to the set of LOD columns. If no LOD columns are specified, all LOD column indices are returned.
strict	Option indicating that lodcolumns, if specified, must request LOD column indices that are unique and in the same order as the LOD columns of x.

Value

Vector of LOD column indices.

gact/utl documentation built on June 1, 2021, 4:24 p.m.