make_geno_matrix: Make genotype matrix from sample and founder genotype data.
In gact/utl: Utility Functions for R/qtl Analysis
Description
Usage
Arguments
Value
Description
Given input genotype data for cross samples and their founder strains, this
function assigns a genotype symbol to each locus according to the inferred
combination of founder alleles.
Usage
1
make_geno_matrix(x, y, alleles = NULL)
Arguments
x
Raw sample genotype matrix.
y
Raw founder genotype matrix.
alleles
Mapping of founder IDs to founder allele symbols.
Value
A founder genotype matrix, with genotypes encoded as integers and
their corresponding genotype symbols in the attribute 'genotypes'.
gact/utl documentation built on June 1, 2021, 4:24 p.m.
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Description Usage Arguments Value
Description
Given input genotype data for cross samples and their founder strains, this function assigns a genotype symbol to each locus according to the inferred combination of founder alleles.
Usage
1 | make_geno_matrix(x, y, alleles = NULL)
|
Arguments
x |
Raw sample genotype |
y |
Raw founder genotype |
alleles |
Mapping of founder IDs to founder allele symbols. |
Value
A founder genotype matrix, with genotypes encoded as integers and
their corresponding genotype symbols in the attribute 'genotypes'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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