make_snp_marker_ids: Make SNP marker IDs for loci.
In gact/utl: Utility Functions for R/qtl Analysis
Description
Usage
Arguments
Value
Author(s)
Description
This function creates SNP marker
IDs from locus data.frame 'loc'.
Usage
1
make_snp_marker_ids(loc, max.seqlength = NULL)
Arguments
loc
Locus data.frame, with columns 'chr' and
'pos', specifying physical map positions in base-pair units.
max.seqlength
Maximum expected sequence length. This determines
the width to which SNP positions are zero-padded. By default, this is
the maximum position in the input data.frame.
Value
Character vector of SNP marker IDs.
Author(s)
Thomas A. Walsh
Yue Hu
gact/utl documentation built on June 1, 2021, 4:24 p.m.
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Description Usage Arguments Value Author(s)
Description
This function creates SNP marker
IDs from locus data.frame 'loc'.
Usage
1 | make_snp_marker_ids(loc, max.seqlength = NULL)
|
Arguments
loc |
Locus |
max.seqlength |
Maximum expected sequence length. This determines
the width to which SNP positions are zero-padded. By default, this is
the maximum position in the input |
Value
Character vector of SNP marker IDs.
Author(s)
Thomas A. Walsh
Yue Hu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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