stickem: Combine two numeric matrices with overlapping samples

In genejockey33000/typGumbo: Scripts and Pipelines for RNAseq Analysis

Combine two numeric matrices with overlapping samples

Description

Two matrices with overlapping samples and different measurements are combined. Matrix supplied as mat1 is used to orient final output. Sample names must have identical formats between the two matrices and must have uniquely identifiable names (i.e. "BR04" rather than vague sample names like "sample1"). That can get you into trouble Samples can be in either row.names or colnames on either matrix. The script will transpose mat2 if necessary. Samples not in both matrices will be removed and output will be in the same orientation (samples in rows or columns) as mat1.

Usage

stickem(mat1, mat2)

Arguments

mat1	matrix 1 containing sample names as either row.names or colnames. Orientation of mat1 will be the orientation of the output matrix.
mat2	matrix 2 containing samples names as either row.names or colnames

Value

combined matrix

genejockey33000/typGumbo documentation built on July 20, 2023, 11:45 p.m.