Files in geneticsMiNIng/metR

Tools for Identification and Visualisation of Differentially Methylated Regions

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/checks_functions.R R/create_tiles_chr.R R/create_tiles_fixed_length.R R/create_tiles_max_gap.R R/draw_methylation.R R/find_DMR.R R/find_DMR_tests.R R/get_quantile.R R/get_stats.R R/get_top.R R/group_data.R R/main_functions.R R/preprocessing.R R/schizophrenia.R R/test_ks.R R/test_reg_corr_mixed.R R/test_reg_log.R R/test_reg_mixed.R R/test_t.R R/test_wilcoxon.R README.md

_pkgdown.yml

cheatsheets/cheatsheet.pdf

data/find.DMR.results.rda

data/mean.acf.chr.rda

data/quantile.function.rda

data/schizophrenia.rda

docs/MI2logo.jpg

docs/articles/index.html

docs/articles/metR_comparison.html

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docs/articles/metR_vignette.R

docs/articles/metR_vignette.html

docs/articles/metR_vignette_files/datatables-1.10.7/jquery.dataTables.min.js

docs/articles/metR_vignette_files/datatables-binding-0.1/datatables.js

docs/articles/metR_vignette_files/datatables-default-1.10.7/dataTables.extra.css

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docs/articles/metR_vignette_files/htmlwidgets-0.9/htmlwidgets.js

docs/articles/metR_vignette_files/jquery-1.11.1/LICENSE.txt

docs/articles/metR_vignette_files/jquery-1.11.1/jquery.min.js

docs/authors.html

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/reference/check_before_using.html

docs/reference/control.html

docs/reference/create_tiles_fixed_length.html

docs/reference/create_tiles_max_gap.html

docs/reference/disease.html

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docs/reference/draw_methylation.html

docs/reference/find_DMR.html

docs/reference/get.stats.html

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docs/reference/get_top.html

docs/reference/index.html

docs/reference/preprocessing.html

docs/reference/reg.log.html

docs/reference/reg_corr_mixed.html

docs/reference/reg_log.html

docs/reference/reg_mixed.html

docs/reference/schizophrenia.html

docs/reference/test_ks.html

docs/reference/test_reg_corr_mixed.html

docs/reference/test_reg_log.html

docs/reference/test_reg_mixed.html

docs/reference/test_t.html

docs/reference/test_wilcoxon.html

examples/prep.MethylomeDB.R examples/prep.WUM.R man/create_tiles_fixed_length.Rd man/create_tiles_max_gap.Rd man/draw_methylation.Rd man/find_DMR.Rd man/get_stats.Rd man/get_top.Rd man/preprocessing.Rd man/schizophrenia.Rd man/test_ks.Rd man/test_reg_corr_mixed.Rd man/test_reg_log.Rd man/test_reg_mixed.Rd man/test_t.Rd man/test_wilcoxon.Rd

metR.Rproj

tests/testthat.R tests/testthat/test_basic_functions.R tests/testthat/test_data_in_package.R tests/testthat/test_find_DMR.R tests/testthat/test_get_stats.R tests/testthat/test_preprocessing_and_create_tiles.R vignettes/metR_comparison.Rmd vignettes/metR_step_by_step.Rmd vignettes/metR_vignette.R

geneticsMiNIng/metR documentation built on May 28, 2019, 8:41 p.m.