plot_entropy_density: Plot the distribution of entropy values

In genomewalker/oligo4fun: Oligtyping diagnostics for functional genes

Description

Plot the distribution of entropy values

Usage

plot_entropy_density(data, process = TRUE)

Arguments

data	a dataframe containing the results of running entropy-analysis command from oligotyping package. It could be a raw file obtained after the entropy-analysis or a processed raw file by process_entropy_file
process	a logical indicating whether to process the entropy data; defaults to TRUE so

Value

a ggplot2 object with

References

Eren, A. M., Morrison, H. G., Lescault, P. J., Reveillaud, J., Vineis, J. H., & Sogin, M. L. (2015). Minimum entropy decomposition: Unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences. The ISME Journal, 9(4), 968-979

Examples

entropy_plot <- plot_entropy_density(entropy)

genomewalker/oligo4fun documentation built on May 17, 2019, 1:11 a.m.