Files in ghthomas/motmot
Models of Trait Macroevolution on Trees
.gitignore
DESCRIPTION
NAMESPACE
R/ML.RatePhylo.R
R/RatePhylo.CI.R
R/RatePhylo.allCI.R
R/allCladeMembers.R
R/as.rateData.R
R/as.rateMatrix.R
R/cladeIdentity.R
R/fairProportions.R
R/likRatePhylo.R
R/likTraitPhylo.R
R/make.anc.R
R/make.likRatePhylo.R
R/name.check.R
R/node.descendents.R
R/optim.likRatePhylo.R
R/phyloCovar.R
R/phyloMean.R
R/phyloVar.R
R/pic.motmot.R
R/plotPhylo.motmot.R
R/traitMedusaSummary.R
R/transformPhylo.ML.R
R/transformPhylo.R
R/transformPhylo.ll.R
R/transformPhylo.sim.R
R/transformRateMatrix.R
README.md
ToDo
data/anolis.data.rda
data/anolis.tree.rda
dataSources/anolis.data.R
dataSources/anolis.data.csv
dataSources/anolis.tree.R
dataSources/anolis.tree.nex
man/ML.RatePhylo.Rd
man/RatePhylo.CI.Rd
man/RatePhylo.allCI.Rd
man/anolis.data.Rd
man/anolis.tree.Rd
man/as.rateData.Rd
man/as.rateMatrix.Rd
man/cladeIdentity.Rd
man/fairProportions.Rd
man/likRatePhylo.Rd
man/likTraitPhylo.Rd
man/make.anc.Rd
man/make.likRatePhylo.Rd
man/motmot-package.Rd
man/node.descendents.Rd
man/optim.likRatePhylo.Rd
man/phyloCovar.Rd
man/phyloMean.Rd
man/phyloVar.Rd
man/pic.motmot.Rd
man/plotPhylo.motmot.Rd
man/traitMedusaSummary.Rd
man/transformPhylo.ML.Rd
man/transformPhylo.Rd
man/transformPhylo.ll.Rd
man/transformPhylo.sim.Rd
man/transformRateMatrix.Rd
