Description Usage Arguments Value Note Author(s) References
This function calculates the phylogenetic mean of the data given the tree and model of evolution
1 |
rateData |
an object of class "rateData" |
rate |
a vector of relative rate parameters. The length of the vector is equal to the number
of rates being estimated. If |
common.mean |
a logical specififying whether each rate category should have its own mean
( |
lambda.est |
Logical. Fit Pagel's lambda. |
lambda |
Numeric value for lambda from 0-1. |
meserr |
Logical. Include measurement error. |
mu |
phylogenetically corrected mean |
The means are output as treatment contrasts.
Gavin Thomas, Rob Freckleton
Thomas GH, Freckleton RP, & Szekely T. 2006. Comparative analyses of the influence of developmental mode on phenotypic diversification rates in shorebirds. Proceedings of the Royal Society B 273, 1619-1624.
Thomas GH, Meiri S, & Phillimore AB. 2009. Body size diversification in Anolis: novel environments and island effects. Evolution 63, 2017-2030.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.