Description Usage Arguments Value Author(s)
View source: R/make.likRatePhylo.R
Internal function. Constructor to allow fixing of rate parameters.
1 | make.likRatePhylo(rateData, fixed, common.mean = FALSE, lambda.est, meserr)
|
rateData |
an object of class "rateData" |
fixed |
A vector stating whether each parameter should be allowed to vary (either |
common.mean |
a logical specififying whether each rate category should have its own mean ( |
lambda.est |
Logical - Logical. Fit Pagel's lambda. |
meserr |
an object of class "rateData" |
Returns a function to be passed to optim.likRatePhylo
Gavin Thomas
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