Calculate fair proportions phylogenetic diversity metric
An object of class "phylo" (see ape package).
Logical - should root to tip node counts be returned (default is FALSE)
Returns a matrix of fair proportion for all tips in phylogeny and node counts if selected.
Redding, D.W. and Mooers, A.O. (2006). Incorporating evolutionary measures into conservation prioritisation. Conservation Biology, 20, 1670-1678.
Isaac, N.J.B., Turvey, S.T., Collen, B., Waterman, C. and Baillie, J.E.M. (2007). Mammals on the EDGE: conservation priorities based on threat and phylogeny. PLoS ONE, 2, e296.
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