Files in gillislab/MetaMarkers
Extract robust markers from multiple datasets
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/annotation.R
R/aurocs.R
R/markers.R
R/meta_markers.R
R/normalization.R
R/pareto_front.R
R/visualization.R
README.md
doc/Annotation.html
doc/HierarchicalAnnotation.html
doc/MetaMarkers.html
man/assign_cells.Rd
man/compute_aurocs.Rd
man/compute_marker_enrichment.Rd
man/compute_markers.Rd
man/compute_umap.Rd
man/convert_to_cpm.Rd
man/design_matrix.Rd
man/export_markers.Rd
man/export_markers_by_cell_type.Rd
man/export_markers_by_group.Rd
man/export_markers_for_cell_type.Rd
man/export_meta_markers.Rd
man/export_meta_markers_by_cell_type.Rd
man/get_cell_type.Rd
man/get_group.Rd
man/get_pareto_markers.Rd
man/make_meta_markers.Rd
man/marker_list_to_matrix.Rd
man/marker_table_to_matrix.Rd
man/plot_assignments.Rd
man/plot_marker_expression.Rd
man/plot_marker_scores.Rd
man/plot_pareto_markers.Rd
man/plot_pareto_summary.Rd
man/read_markers.Rd
man/read_meta_markers.Rd
man/remove_duplicated_genes.Rd
man/score_cells.Rd
man/summarize_auroc.Rd
man/summarize_fold_change.Rd
man/summarize_precision_recall.Rd
vignettes/Annotation.Rmd
vignettes/HierarchicalAnnotation.Rmd
vignettes/MetaMarkers.Rmd
