show-methods: show method

In girke-lab/signatureSearch: Environment for Gene Expression Searching Combined with Functional Enrichment Analysis

show method

Description

show qSig, gessResult, feaResult objects

Usage

## S4 method for signature 'feaResult'
show(object)

show(object)

## S4 method for signature 'qSig'
show(object)

Arguments

object

object used for show

Value

message

Examples

fr <- feaResult(result=dplyr::tibble(id=letters[seq_len(10)], 
                                     val=seq_len(10)),
                organism="human", ontology="MF", drugs=c("d1", "d2"), 
                targets=c("t1","t2"))
fr 
gr <- gessResult(result=dplyr::tibble(pert=letters[seq_len(10)], 
                               val=seq_len(10)), 
                 query=list(up=c("g1","g2"), down=c("g3","g4")),
                 gess_method="LINCS", refdb="path/to/lincs/db")
gr

girke-lab/signatureSearch documentation built on Feb. 21, 2024, 8:32 a.m.