gladex/COPAR: ChIP-seq Optimal Peak AnalyzeR
The package aims to detect the optimal peak number candidate with statistically meaningful False Discovery Rate (FDR, e.g. 0.05) from aligned BED-format ChIP-seq data. Secondly, the package provides functions to retrieve signal patterns from the detect optimal peak count candidate. Thus it provides a quantitative measure for genomic feature extraction and comparison.
Getting started
Browse package contents
Package details |
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| Author | Binhua Tang |
| Maintainer | Binhua Tang <bh.tang@outlook.com> |
| License | GPL version 2 or newer |
| Version | 1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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