Description Usage Arguments Author(s) References Examples
This package function will analyze the signal pattern of the detected peak count candidate list. Together it will generate a heatmap plot (TIFF format) for the randomized sequence of the detected peak count candiate list.
1 2 | copar.SigPattern(inpFile = "SRR015350_copa.rda",
plotSigPattern = T)
|
inpFile |
The input data file, e.g. inpFile = "SRR015350_copa.rda" |
plotSigPattern |
If plotSigPattern==TURE, it will generate heatmap plots (TIFF format) for both input peak count candidate list and its corresponding randomized candiate list. |
Binhua Tang <bh.tang@outlook.com>
1. Tang B, Hsu H-K, Hsu P-Y, Bonneville R, Chen S-S, Huang TH-M, et al. Hierarchical modularity in ER¦Á transcriptional network is associated with distinct functions and implicates clinical outcomes. NPG Scientific Reports. 2012;2.
1 2 3 4 5 6 | library(COPAR)
## check the help docs.
?copar.SigPattern
## run copar.SigPattern
copar.SigPattern(inpFile = "SRR015350_copa.rda",
plotSigPattern = T)
|
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