Man pages for gosianow/DRIMSeq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
| dmDSdata | Create dmDSdata object |
| dmDSdata-class | dmDSdata object |
| dmDSfit-class | dmDSfit object |
| dmDSprecision-class | dmDSprecision object |
| dmDStest-class | dmDStest object |
| dmFilter | Filtering |
| dmFit | Fit the Dirichlet-multinomial and/or the beta-binomial full... |
| dm_plotDataDSInfo | Plot the frequency of present features |
| dm_plotProportions | Plot feature proportions |
| dmPrecision | Estimate the precision parameter in the Dirichlet-multinomial... |
| dmSQTLdata | Create dmSQTLdata object |
| dmSQTLdata-class | dmSQTLdata object |
| dmSQTLfit-class | dmSQTLfit object |
| dmSQTLprecision-class | dmSQTLprecision object |
| dmSQTLtest-class | dmSQTLtest object |
| dmTest | Likelihood ratio test to detect differential transcript/exon... |
| MatrixList-class | MatrixList object |
| plotData | Plot data summary |
| plotPrecision | Precision versus mean expression plot |
| plotProportions | Plot feature proportions |
| plotPValues | Plot p-value distribution |
