Files in graeberlab/small.cell.project

small.cell.project

R/MINT.PLSDA_from_file_and_predict_second_dataset.R R/MINT.PLSR_from_file_and_predict_second_dataset.R R/PCA_from_file.R R/PCA_from_file_and_predict_second_dataset.R R/PLSDA_from_file.R R/PLSDA_from_file_and_predict_second_dataset.R R/PLSR_from_file.R R/PLSR_from_file_and_predict_second_dataset.R R/create_RRHO_file_intersect_then_rank.R R/create_log_tcga_files_cancer.R R/create_log_tcga_files_normal.R R/create_tcga_boxplots.R R/create_tcga_methyl_files.R R/create_tcga_prediction_boxplots.R R/do.survival.R R/do_full_boxplot.R R/do_full_boxplot_RNA.R R/do_full_boxplot_meth.R R/intersect_all.R R/intersect_doPCA_from_file_and_project_second_dataset.R R/intersect_log_doPCA_from_file_and_project_second_dataset.R R/log_PCA_from_file.R R/make_loadings_gctfile.R R/make_scores_file.R R/pick.samples.R R/plot_pca.R R/plot_pca_and_save.R R/plot_pca_projection.R R/plot_pca_projection_all.R R/plot_pca_projection_and_save.R R/plot_pca_projection_only.R R/plot_pls.R R/predict_MINT.PLSDA_graph.R R/predict_MINT.PLSR_graph.R R/predict_PCA_graph.R R/predict_PLSDA_graph.R R/predict_PLSR_graph.R R/pval_graph.R R/seg_to_gene.R R/simple_ttest.R README.md man/MINT.PLSDA_from_file_and_predict_second_dataset.Rd man/MINT.PLSR_from_file_and_predict_second_dataset.Rd man/PCA_from_file.Rd man/PCA_from_file_and_predict_second_dataset.Rd man/PLSDA_from_file.Rd man/PLSDA_from_file_and_predict_second_dataset.Rd man/PLSR_from_file.Rd man/PLSR_from_file_and_predict_second_dataset.Rd man/create_RRHO_file_intersect_then_rank.Rd man/create_log_tcga_files_cancer.Rd man/create_log_tcga_files_normal.Rd man/create_tcga_boxplots.Rd man/create_tcga_methyl_files.Rd man/do.survival.Rd man/do_full_boxplot_RNA.Rd man/do_full_boxplot_meth.Rd man/intersect_all.Rd man/intersect_doPCA_from_file_and_project_second_dataset.Rd man/intersect_log_doPCA_from_file_and_project_second_dataset.Rd man/log_PCA_from_file.Rd man/make_loadings_gctfile.Rd man/make_scores_file.Rd man/pick.samples.Rd man/plot_pca.Rd man/plot_pca_and_save.Rd man/plot_pca_projection.Rd man/plot_pca_projection_all.Rd man/plot_pca_projection_and_save.Rd man/plot_pca_projection_only.Rd man/plot_pls.Rd man/predict_MINT.PLSDA_graph.Rd man/predict_MINT.PLSR_graph.Rd man/predict_PCA_graph.Rd man/predict_PLSDA_graph.Rd man/predict_PLSR_graph.Rd man/pval_graph.Rd man/seg_to_gene.Rd man/simple_ttest.Rd man/tcga_boxplots.Rd