load_biopax_file: Load BioPAX from OWL File
In grishagin/RIGbiopax: Extract and Compare Genes and Pathways from BioPAX
Description
Usage
Arguments
Details
Author(s)
Description
Tries to load a BioPAX object from an OWL file.
Usage
1
load_biopax_file(source_name = NULL, source_dir = NULL)
Arguments
source_name
Name of a BioPAX source.
Used to search for a directory with the source OWL file.
source_dir
Directory with BioPAX files (optional).
Details
This function tries to perform a fuzzy search for a directory
that contains source_name inside a source_dir.
This is useful when you have several "sources" of pathways,
i.e. SciSig, Biocarta, etc., with only one OWL file per directory.
Author(s)
Ivan Grishagin
grishagin/RIGbiopax documentation built on May 24, 2019, 1:33 a.m.
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Description Usage Arguments Details Author(s)
Description
Tries to load a BioPAX object from an OWL file.
Usage
1 | load_biopax_file(source_name = NULL, source_dir = NULL)
|
Arguments
source_name |
Name of a BioPAX source. Used to search for a directory with the source OWL file. |
source_dir |
Directory with BioPAX files (optional). |
Details
This function tries to perform a fuzzy search for a directory
that contains source_name inside a source_dir.
This is useful when you have several "sources" of pathways,
i.e. SciSig, Biocarta, etc., with only one OWL file per directory.
Author(s)
Ivan Grishagin
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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