read_rtab: read_rtab

View source: R/read_rtab.R

read_rtabR Documentation

read_rtab

Description

Loads an Rtab pangenome gene presence/absence file as produced by Panaroo, Roary and other prokaryotic pangenome programs

Usage

read_rtab(file)

Arguments

file

a binary tab delimited gene presence/absence matrix (.Rtab) with gene names in the first column

Value

a binary matrix

Examples


file <- system.file("extdata", "gene_presence_absence.Rtab", package = "panstripe")
pa <- read_rtab(file)


gtonkinhill/panstripe documentation built on Feb. 27, 2025, 9:01 p.m.