Files in gtonkinhill/rhierbaps

Clustering Genetic Sequence Data Using the HierBAPS Algorithm

.Rbuildignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/calc_change_in_ml.R R/calc_log_ml.R R/hierBAPS.R R/join_units_2.R R/load_fasta.R R/log_stirling2.R R/model_search_parallel.R R/move_units_1.R R/plot_sub_cluster.R R/preproc_alignment.R R/reallocate_units_4.R R/save_lml_logs.R R/split_clusters_3.R README.Rmd README.md cran-comments.md

inst/.DS_Store

inst/CITATION

inst/extdata/seqs.fa

inst/extdata/seqs.fa.treefile

inst/extdata/small_seqs.fa

inst/vignette-supp/unnamed-chunk-13-1.png

inst/vignette-supp/unnamed-chunk-14-1.png

inst/vignette-supp/unnamed-chunk-15-1.png

inst/vignette-supp/unnamed-chunk-16-1.png

inst/vignette-supp/unnamed-chunk-17-1.png

man/calc_change_in_ml.Rd man/calc_log_ml.Rd man/hierBAPS.Rd man/join_units_2.Rd man/load_fasta.Rd man/model_search_parallel.Rd man/move_units_1.Rd man/plot_sub_cluster.Rd man/preproc_alignment.Rd man/reallocate_units_4.Rd man/save_lml_logs.Rd man/split_clusters_3.Rd

rhierbaps.Rproj

vignettes/bibliography.bib

vignettes/introduction.Rmd

gtonkinhill/rhierbaps documentation built on May 3, 2021, 9:04 p.m.