guokai8/scGSVA
GSVA and UCell signature enrichment analysis for single cell RNA seq

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Vignettes
Functions
99
Source code
9
Man pages
36
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guokai8/scGSVA: GSVA and UCell signature enrichment analysis for single cell RNA seq
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API

API for guokai8/scGSVA
GSVA and UCell signature enrichment analysis for single cell RNA seq

Global functions
.clean.char Source code
.do_aov Man page Source code
.do_ttest Man page Source code
.do_wilcox Man page Source code
.get.quantile Man page Source code
.get_go_dat Source code
.get_kg_dat Source code
.get_kgm.data Source code
.getann Man page Source code
.getdb Source code
.getdbname Source code
.getmsig Man page Source code
.getrodbname Source code
.getspeices Source code
.is_inst Source code
.load_pkg Source code
.makeGOdata Man page Source code
.makeKOMdata Man page Source code
.makeKOdata Man page Source code
.makeROdata Man page Source code
.onAttach Source code Source code
.onLoad Source code
.paste.char Source code
.sgsva Source code
.vec_to_df Source code
Annot-class Man page
AttachDeps Source code
GSVA-class Man page
Heatmap Man page Source code
`$.Annot` Source code
`$.GSVA` Source code
`[.Annot` Source code
`[.GSVA` Source code
as.data.frame.Annot Source code
as.data.frame.GSVA Source code
buildAnnot Man page Source code
buildMSIGDB Man page Source code
colnames.Annot Source code
colnames.GSVA Source code
dim.Annot Source code
dim.GSVA Source code
distcolor Man page
dotPlot Man page Source code
featurePlot Man page Source code
findPathway Man page Source code
genes Man page
genes,GSVA-method Man page
geom_split_violin Source code
head.Annot Source code
head.GSVA Source code
idconvert Man page Source code
lightcolor Man page
msigdbinfo Man page Source code
names.Annot Source code
names.GSVA Source code
pbmc Man page
pbmcs Man page
ridgePlot Man page Source code
row.names.Annot Source code
row.names.GSVA Source code
sce_small Man page
scgsva Man page Source code
set.cut.off Man page Source code
showData Man page Source code
sigPathway Man page Source code
spatialFeaturePlot Man page Source code
split.data.matrix Man page Source code
subset.GSVA Man page Source code
tail.Annot Source code
tail.GSVA Source code
vlnPlot Man page Source code
guokai8/scGSVA documentation built on Nov. 15, 2024, 12:54 a.m.

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