test_cibersort: Test cibersort using one of the expression matrices provided
In hammerlab/rinfino: R-friendly client to run infino (http://github.com/hammerlab/infino)
Description
Test cibersort using one of the expression matrices provided
Usage
1
2
3
4
test_cibersort(tmpdir = tempdir(), output_file = file.path(tmpdir,
"cibersort_output.tsv"), test_case = "ExampleMixtures-GEPs.txt",
cibersort_home = "~/cibersort", input_file = file.path(cibersort_home,
test_case))
hammerlab/rinfino documentation built on May 27, 2019, 8:45 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Test cibersort using one of the expression matrices provided
Usage
1 2 3 4 | test_cibersort(tmpdir = tempdir(), output_file = file.path(tmpdir,
"cibersort_output.tsv"), test_case = "ExampleMixtures-GEPs.txt",
cibersort_home = "~/cibersort", input_file = file.path(cibersort_home,
test_case))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.