harshsharma-cb/FASE: Analysis of RNA-Sequencing data using FASE (Finding Alternative Splicing Events).
The pipeline is based on differential alternative splicing events and predicts the transcript structure and their concentration along with survival analysis. This is the first kind of pipeline that takes advantage of differential alternative splicing events for finding novel transcripts that are neglected due to low expression in transcript level statistical analysis. It also contains wrapper functions to find Differentially Expressed Genes and Differentially Expressed Junctions.
Getting started
Browse package contents
Package details |
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| Author | Harsh Sharma, Ravi Datta Sharma |
| Maintainer | Harsh Sharma <harshsharma.cb@gmail.com> |
| License | GNU General Public License (GPL) |
| Version | 0.1.24 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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