Man pages for heuselm/mocode
Integrates MS-based-proteomics Data Analysis Code
| alignPepModFormat | alignPepModFormat |
| benchmarkCorNetwork | Benchmark Correlation-Score Network against a Reference... |
| benchmarkNetwork | Benchmarks a Network against a Reference Network/Interaction... |
| calculateIDOverlapMatrix | calculateIDOverlapMatrix |
| calculateSibTransCorr | Calculate sibling transition/fragment ion correlation in... |
| compareDiannResultSets | compareDiannResultSets |
| compareSets | compareSets |
| conSecFilter | conSecFilter |
| convertMzID2tsv | convertMzID2tsv |
| createGroupsFromNetworkTable | createGroupsFromNetworkTable create protein groups around... |
| extractIdsFromFastaHeader | extractIdsFromFastaHeader |
| flattenCorrMatrix | Flattens Correlation Matrix to table with columns row, column... |
| fromListWithNames | fromListWithNames |
| generateCorNetwork | Generate Correlation-Score Network Table from SEC... |
| getFFTs | Get fraction of false targets |
| getSetAnalysisGroups | getSetAnalysisGroups |
| IDOverlapHeatmap | IDOverlapHeatmap |
| intactParser | Intact Parser |
| maxlynx2xvis | maxlynx2xvis simplify maxlynx crosslinks table for... |
| pairVenn | pairVenn |
| plotFilterImpact | Plot Peptide Elution Profiles per Protein without and with... |
| plotPANTHERresult | Plot PantherDB enrichment/overrepresentation test result |
| plotPeptideProfiles | plotPeptideProfiles |
| plotTicProfiles | plotTicProfiles |
| splitFragPipeProteinTable | splitFragPipeProteinTable Splits FragPipe... |
