generateCorNetwork: Generate Correlation-Score Network Table from SEC...

In heuselm/mocode: Integrates MS-based-proteomics Data Analysis Code

Generate Correlation-Score Network Table from SEC protein.traces

Description

Generate Correlation-Score Network Table from SEC protein.traces

Usage

generateCorNetwork(
  protein.traces,
  cutoff = -1,
  protcolnames = c("uniprot_a", "uniprot_b")
)

Arguments

cutoff	Correlation score cutoff to apply before returning the output table
protcolnames	Allows to set the column names of the protein-identifier containing columns. Defaults to c("bait_id", "protein_id"), alternative, e.g.: protcolnames = c("uniprot_a", "uniprot_b").
rams	protein.traces data.table with protein.traces, uniprot ids in column 1

Value

data.frame with column headers as defined in protcolnames (uniprot_a uniprot_b) and cor_pearson and cor_spearman.

heuselm/mocode documentation built on Oct. 23, 2023, 8:43 a.m.