eTerm: Definition for S3 class 'eTerm'

Description Usage Arguments Value Examples

View source: R/ClassMethod-XGR.r

Description

eTerm mush have following components: term_info, annotation, g, data, background, overlap, fc, zscore, pvalue, adjp, cross.

Usage

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eTerm(term_info, annotation, g, data, background, overlap, fc, zscore,
pvalue, adjp, cross)

## S3 method for class 'eTerm'
print(x, ...)

Arguments

term_info

a data frame

annotation

a list

g

an 'igraph' object

data

a vector

background

a vector

overlap

a vector

fc

a vector

zscore

a vector

pvalue

a vector

adjp

a vector

cross

a matrix

x

an object of class eTerm

...

other parameters

Value

an object of S3 class eTerm

Examples

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## Not run: 
# Load the library
library(XGR)

## End(Not run)
RData.location <- "http://galahad.well.ox.ac.uk/bigdata"
## Not run: 
eTerm(term_info, annotation, g, data, background, overlap, fc, zscore,
pvalue, adjp, cross)

## End(Not run)

hfang-bristol/XGR documentation built on Sept. 23, 2018, 3:25 p.m.