Files in hfang-bristol/XGR

Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis

DESCRIPTION

NAMESPACE

R/ClassMethod-XGR.r R/xAddCoords.r R/xAggregate.r R/xAuxEmbed.r R/xAuxFunArgs.r R/xAuxRd2HTML.r R/xAuxRdWrap.r R/xAuxSI.r R/xCheckParallel.r R/xCircos.r R/xColormap.r R/xCombineNet.r R/xConverter.r R/xCtree.r R/xDAGanno.r R/xDAGpropagate.r R/xDAGsim.r R/xDefineEQTL.r R/xDefineGenomicAnno.r R/xDefineHIC.r R/xDefineNet.r R/xDefineOntology.r R/xEnrichBarplot.r R/xEnrichChord.r R/xEnrichCompare.r R/xEnrichConciser.r R/xEnrichCtree.r R/xEnrichD3.r R/xEnrichDAGplot.r R/xEnrichDAGplotAdv.r R/xEnrichDotplot.r R/xEnrichForest.r R/xEnrichGGraph.r R/xEnrichHeatmap.r R/xEnrichLadder.r R/xEnrichMatrix.r R/xEnrichNetplot.r R/xEnrichRadial.r R/xEnrichTreemap.r R/xEnrichViewer.r R/xEnricher.r R/xEnricherGenes.r R/xEnricherGenesAdv.r R/xEnricherSNPs.r R/xEnricherYours.r R/xGGnetwork.r R/xGGraph.r R/xGR.r R/xGR2GeneScores.r R/xGR2nGenes.r R/xGR2xGeneAnno.r R/xGR2xGeneAnnoAdv.r R/xGR2xGeneScores.r R/xGR2xGenes.r R/xGRcse.r R/xGRsampling.r R/xGRscores.r R/xGRsep.r R/xGRsort.r R/xGRviaGeneAnno.r R/xGRviaGeneAnnoAdv.r R/xGRviaGenomicAnno.r R/xGRviaGenomicAnnoAdv.r R/xGeneID2Symbol.r R/xGraphML.r R/xGraphML2AA.r R/xHeatmap.r R/xHeatmapAdv.r R/xIG2TB.r R/xLayout.r R/xLiftOver.r R/xMEabf.r R/xMakeGenes.r R/xMakeGenesets.r R/xMarkNet.r R/xOBOcode.r R/xObjSize.r R/xPieplot.r R/xRDS.r R/xRDataLoader.r R/xReport.r R/xSM2DF.r R/xSNP2GeneScores.r R/xSNP2cGenes.r R/xSNP2eGenes.r R/xSNP2nGenes.r R/xSNPlocations.r R/xSNPscores.r R/xSimplifyNet.r R/xSocialiser.r R/xSocialiserDAGplot.r R/xSocialiserDAGplotAdv.r R/xSocialiserGenes.r R/xSocialiserNetplot.r R/xSocialiserSNPs.r R/xSparseMatrix.r R/xSubneterGR.r R/xSubneterGenes.r R/xSubneterGenesAdv.r R/xSubneterGenesMST.r R/xSubneterSNPs.r R/xSymbol2GeneID.r R/xTB2IG.r R/xVisKernels.r R/xVisNet.r README.md

Read-and-delete-me

data/Haploid_regulators.RData

data/ImmunoBase.RData

data/JKscience_TS2A.RData

inst/CITATION

inst/DynamicReport/eTerm.Rmd

inst/EG.html

inst/GS.html

inst/Haploid_regulators.html

inst/ImmunoBase.html

inst/JKscience_TS2A.html

inst/NEWS

inst/XGR.icon.png

inst/XGR.logo.png

inst/aOnto.html

inst/eTerm.html

inst/iSubg.html

inst/ls_eTerm.html

inst/xAddCoords.html

inst/xAggregate.html

inst/xAuxEmbed.html

inst/xAuxFunArgs.html

inst/xAuxRd2HTML.html

inst/xAuxRdWrap.html

inst/xAuxSI.html

inst/xCheckParallel.html

inst/xCircos.html

inst/xColormap.html

inst/xCombineNet.html

inst/xConverter.html

inst/xCtree.html

inst/xDAGanno.html

inst/xDAGpropagate.html

inst/xDAGsim.html

inst/xDefineEQTL.html

inst/xDefineGenomicAnno.html

inst/xDefineHIC.html

inst/xDefineNet.html

inst/xDefineOntology.html

inst/xEnrichBarplot.html

inst/xEnrichChord.html

inst/xEnrichCompare.html

inst/xEnrichConciser.html

inst/xEnrichCtree.html

inst/xEnrichD3.html

inst/xEnrichDAGplot.html

inst/xEnrichDAGplotAdv.html

inst/xEnrichDotplot.html

inst/xEnrichForest.html

inst/xEnrichGGraph.html

inst/xEnrichHeatmap.html

inst/xEnrichLadder.html

inst/xEnrichMatrix.html

inst/xEnrichNetplot.html

inst/xEnrichRadial.html

inst/xEnrichTreemap.html

inst/xEnrichViewer.html

inst/xEnricher.html

inst/xEnricherGenes.html

inst/xEnricherGenesAdv.html

inst/xEnricherSNPs.html

inst/xEnricherYours.html

inst/xGGnetwork.html

inst/xGGraph.html

inst/xGR.html

inst/xGR2GeneScores.html

inst/xGR2nGenes.html

inst/xGR2xGeneAnno.html

inst/xGR2xGeneAnnoAdv.html

inst/xGR2xGeneScores.html

inst/xGR2xGenes.html

inst/xGRcse.html

inst/xGRsampling.html

inst/xGRscores.html

inst/xGRsep.html

inst/xGRsort.html

inst/xGRviaGeneAnno.html

inst/xGRviaGeneAnnoAdv.html

inst/xGRviaGenomicAnno.html

inst/xGRviaGenomicAnnoAdv.html

inst/xGeneID2Symbol.html

inst/xGraphML.html

inst/xGraphML2AA.html

inst/xHeatmap.html

inst/xHeatmapAdv.html

inst/xIG2TB.html

inst/xLayout.html

inst/xLiftOver.html

inst/xMEabf.html

inst/xMakeGenes.html

inst/xMakeGenesets.html

inst/xMarkNet.html

inst/xOBOcode.html

inst/xObjSize.html

inst/xPieplot.html

inst/xRDS.html

inst/xRDataLoader.html

inst/xReport.html

inst/xSM2DF.html

inst/xSNP2GeneScores.html

inst/xSNP2cGenes.html

inst/xSNP2eGenes.html

inst/xSNP2nGenes.html

inst/xSNPlocations.html

inst/xSNPscores.html

inst/xSimplifyNet.html

inst/xSocialiser.html

inst/xSocialiserDAGplot.html

inst/xSocialiserDAGplotAdv.html

inst/xSocialiserGenes.html

inst/xSocialiserNetplot.html

inst/xSocialiserSNPs.html

inst/xSparseMatrix.html

inst/xSubneterGR.html

inst/xSubneterGenes.html

inst/xSubneterGenesAdv.html

inst/xSubneterGenesMST.html

inst/xSubneterSNPs.html

inst/xSymbol2GeneID.html

inst/xTB2IG.html

inst/xVisKernels.html

inst/xVisNet.html

man/EG.Rd man/GS.Rd man/Haploid_regulators.Rd man/ImmunoBase.Rd man/JKscience_TS2A.Rd man/aOnto.Rd man/eTerm.Rd man/iSubg.Rd man/ls_eTerm.Rd man/xAddCoords.Rd man/xAggregate.Rd man/xAuxEmbed.Rd man/xAuxFunArgs.Rd man/xAuxRd2HTML.Rd man/xAuxRdWrap.Rd man/xAuxSI.Rd man/xCheckParallel.Rd man/xCircos.Rd man/xColormap.Rd man/xCombineNet.Rd man/xConverter.Rd man/xCtree.Rd man/xDAGanno.Rd man/xDAGpropagate.Rd man/xDAGsim.Rd man/xDefineEQTL.Rd man/xDefineGenomicAnno.Rd man/xDefineHIC.Rd man/xDefineNet.Rd man/xDefineOntology.Rd man/xEnrichBarplot.Rd man/xEnrichChord.Rd man/xEnrichCompare.Rd man/xEnrichConciser.Rd man/xEnrichCtree.Rd man/xEnrichD3.Rd man/xEnrichDAGplot.Rd man/xEnrichDAGplotAdv.Rd man/xEnrichDotplot.Rd man/xEnrichForest.Rd man/xEnrichGGraph.Rd man/xEnrichHeatmap.Rd man/xEnrichLadder.Rd man/xEnrichMatrix.Rd man/xEnrichNetplot.Rd man/xEnrichRadial.Rd man/xEnrichTreemap.Rd man/xEnrichViewer.Rd man/xEnricher.Rd man/xEnricherGenes.Rd man/xEnricherGenesAdv.Rd man/xEnricherSNPs.Rd man/xEnricherYours.Rd man/xGGnetwork.Rd man/xGGraph.Rd man/xGR.Rd man/xGR2GeneScores.Rd man/xGR2nGenes.Rd man/xGR2xGeneAnno.Rd man/xGR2xGeneAnnoAdv.Rd man/xGR2xGeneScores.Rd man/xGR2xGenes.Rd man/xGRcse.Rd man/xGRsampling.Rd man/xGRscores.Rd man/xGRsep.Rd man/xGRsort.Rd man/xGRviaGeneAnno.Rd man/xGRviaGeneAnnoAdv.Rd man/xGRviaGenomicAnno.Rd man/xGRviaGenomicAnnoAdv.Rd man/xGeneID2Symbol.Rd man/xGraphML.Rd man/xGraphML2AA.Rd man/xHeatmap.Rd man/xHeatmapAdv.Rd man/xIG2TB.Rd man/xLayout.Rd man/xLiftOver.Rd man/xMEabf.Rd man/xMakeGenes.Rd man/xMakeGenesets.Rd man/xMarkNet.Rd man/xOBOcode.Rd man/xObjSize.Rd man/xPieplot.Rd man/xRDS.Rd man/xRDataLoader.Rd man/xReport.Rd man/xSM2DF.Rd man/xSNP2GeneScores.Rd man/xSNP2cGenes.Rd man/xSNP2eGenes.Rd man/xSNP2nGenes.Rd man/xSNPlocations.Rd man/xSNPscores.Rd man/xSimplifyNet.Rd man/xSocialiser.Rd man/xSocialiserDAGplot.Rd man/xSocialiserDAGplotAdv.Rd man/xSocialiserGenes.Rd man/xSocialiserNetplot.Rd man/xSocialiserSNPs.Rd man/xSparseMatrix.Rd man/xSubneterGR.Rd man/xSubneterGenes.Rd man/xSubneterGenesAdv.Rd man/xSubneterGenesMST.Rd man/xSubneterSNPs.Rd man/xSymbol2GeneID.Rd man/xTB2IG.Rd man/xVisKernels.Rd man/xVisNet.Rd

hfang-bristol/XGR documentation built on Feb. 4, 2023, 7:05 a.m.