Files in hms-dbmi/spp
ChIP-Seq Processing Pipeline
DESCRIPTION
NAMESPACE
R/zroutines.R
README.md
configure
configure.ac
man/add.broad.peak.regions.Rd
man/densum.Rd
man/find.binding.positions.Rd
man/get.binding.characteristics.Rd
man/get.broad.enrichment.clusters.Rd
man/get.conservative.fold.enrichment.profile.Rd
man/get.conservative.fold.enrichment.profile2.Rd
man/get.mser.Rd
man/get.mser.interpolation.Rd
man/get.smoothed.enrichment.mle.Rd
man/get.smoothed.enrichment.mle2.Rd
man/get.smoothed.tag.density.Rd
man/output.binding.results.Rd
man/points.within.Rd
man/points_withinFunction.Rd
man/read.arachne.tags.Rd
man/read.bam.tags.Rd
man/read.bin.maqmap.tags.Rd
man/read.bowtie.tags.Rd
man/read.eland.tags.Rd
man/read.helicos.tags.Rd
man/read.maqmap.tags.Rd
man/read.meland.tags.Rd
man/read.short.arachne.tags.Rd
man/read.tagalign.tags.Rd
man/remove.local.tag.anomalies.Rd
man/select.informative.tags.Rd
man/spp-package.Rd
man/write.broadpeak.info.Rd
man/write.narrowpeak.binding.Rd
man/writewig.Rd
src/Makevars.in
src/api_global.h
src/bed2vector.cpp
src/cdensum.c
src/const.h
src/maqmap.c
src/maqmap.h
src/maqread.cpp
src/pc.h
src/peaks.cpp
src/spp_init.c
src/wdl.cpp
