getTargets: Function to retrieve Log2FC values for TF targets in ATAC...
In hmumme/finalProjectMUMME: What the Package Does (One Line, Title Case)
getTargets R Documentation
Function to retrieve Log2FC values for TF targets in ATAC based on input topTFs for cluster/groups in RNA
Description
Function to retrieve Log2FC values for TF targets in ATAC based on input topTFs for cluster/groups in RNA
Usage
getTargets(tfs, markers, db)
Arguments
tfs
output from getTFs, list of top TFs per cluster/group
markers
ATAC top markers per cluster/group, output from ArchR::getMarkers() function
db
TF-target database with names(db) as TFs
hmumme/finalProjectMUMME documentation built on April 22, 2022, 12:43 a.m.
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| getTargets | R Documentation |
Function to retrieve Log2FC values for TF targets in ATAC based on input topTFs for cluster/groups in RNA
Description
Function to retrieve Log2FC values for TF targets in ATAC based on input topTFs for cluster/groups in RNA
Usage
getTargets(tfs, markers, db)
Arguments
tfs |
output from getTFs, list of top TFs per cluster/group |
markers |
ATAC top markers per cluster/group, output from ArchR::getMarkers() function |
db |
TF-target database with names(db) as TFs |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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