bestClusterTreeThresholds: caculate jacard coefficiency from best maching tree
In huqiwen0313/speciesTree: Tree based method for cross-species integration
Description
caculate jacard coefficiency from best maching tree
Usage
1
bestClusterTreeThresholds(res, leaf.factor, clusters, clmerges = NULL)
Arguments
res
either subsampled hierarchical graphs or a list contains
merge matrix that have the similar format as igraph:::complete.dend
leaf.factor
factor contain cell id and leaf clusters
clusters
original clusters
huqiwen0313/speciesTree documentation built on Dec. 24, 2021, 8:10 p.m.
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Description
caculate jacard coefficiency from best maching tree
Usage
1 | bestClusterTreeThresholds(res, leaf.factor, clusters, clmerges = NULL)
|
Arguments
res |
either subsampled hierarchical graphs or a list contains merge matrix that have the similar format as igraph:::complete.dend |
leaf.factor |
factor contain cell id and leaf clusters |
clusters |
original clusters |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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