cropVisiumImage: Crop image in Seuart Visium object
In iaaka/visutils: QC, analyse and visualize visium
View source: R/visium.utilities.R
View source: R/.ipynb_checkpoints/visium.utilities-checkpoint.R
cropVisiumImage R Documentation
Crop image in Seuart Visium object
Description
Retain square image that contains all spots (listed in the object). Spot coordinates adjasted accordingly.
Usage
cropVisiumImage(v, image.name = NULL)
Arguments
v
Seurat object
Value
visium object with cropped image
iaaka/visutils documentation built on Jan. 17, 2025, 11:29 p.m.
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View source: R/visium.utilities.R View source: R/.ipynb_checkpoints/visium.utilities-checkpoint.R
| cropVisiumImage | R Documentation |
Crop image in Seuart Visium object
Description
Retain square image that contains all spots (listed in the object). Spot coordinates adjasted accordingly.
Usage
cropVisiumImage(v, image.name = NULL)
Arguments
v |
Seurat object |
Value
visium object with cropped image
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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