plotFEA: plotFEA

In ibsquare/MoonlightR: Identify oncogenes and tumor suppressor genes from omics data

plotFEA

Description

This function visualize the functional enrichment analysis (FEA)'s barplot

Usage

plotFEA(
  dataFEA,
  topBP = 10,
  additionalFilename = NULL,
  height,
  width,
  offsetValue = 5,
  angle = 90,
  xleg = 35,
  yleg = 5,
  titleMain,
  minY = -5,
  maxY = 10,
  mycols = c("#8DD3C7", "#FFFFB3", "#BEBADA")
)

Arguments

dataFEA	dataFEA
topBP	topBP
additionalFilename	additionalFilename
height	Figure height
width	Figure width
offsetValue	offsetValue
angle	angle
xleg	xleg
yleg	yleg
titleMain	title of the plot
minY	minY
maxY	maxY
mycols	colors to use for the plot

Value

no return value, FEA result is plotted

Examples

dataFEA <- FEA(DEGsmatrix = DEGsmatrix)
plotFEA(dataFEA = dataFEA, additionalFilename = "_example",height = 20,width = 10)

ibsquare/MoonlightR documentation built on May 19, 2024, 6:16 a.m.