plotURA: plotURA: Upstream regulatory analysis heatmap plot
In ibsquare/MoonlightR: Identify oncogenes and tumor suppressor genes from omics data
plotURA R Documentation
plotURA: Upstream regulatory analysis heatmap plot
Description
This function visualizes the URA in a heatmap
Usage
plotURA(dataURA, additionalFilename = "URAplot")
Arguments
dataURA
output URA function
additionalFilename
figure name
Value
heatmap
Examples
data(dataURA)
dataDual <- PRA(dataURA = dataURA,
BPname = c("apoptosis","proliferation of cells"),
thres.role = 0)
TSGs_genes <- names(dataDual$TSG)
OCGs_genes <- names(dataDual$OCG)
plotURA(dataURA = dataURA[c(TSGs_genes, OCGs_genes),],additionalFilename = "_example")
ibsquare/MoonlightR documentation built on May 19, 2024, 6:16 a.m.
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| plotURA | R Documentation |
plotURA: Upstream regulatory analysis heatmap plot
Description
This function visualizes the URA in a heatmap
Usage
plotURA(dataURA, additionalFilename = "URAplot")
Arguments
dataURA |
output URA function |
additionalFilename |
figure name |
Value
heatmap
Examples
data(dataURA)
dataDual <- PRA(dataURA = dataURA,
BPname = c("apoptosis","proliferation of cells"),
thres.role = 0)
TSGs_genes <- names(dataDual$TSG)
OCGs_genes <- names(dataDual$OCG)
plotURA(dataURA = dataURA[c(TSGs_genes, OCGs_genes),],additionalFilename = "_example")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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