iferres/quickMLST
Quick Multi Locus Sequence Typing Analisys

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iferres/quickMLST: Quick Multi Locus Sequence Typing Analisys
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Man pages for iferres/quickMLST
Quick Multi Locus Sequence Typing Analisys

blastnSeach with Blastn.
doMLSTPerform MLST Analysis Over a List of Genomes
downloadPubmlst_profileDownload the Profile for a Given MLST Scheme
downloadPubmlst_seqDownload Genes for a Given MLST Scheme
getfGet a vector of integers which represents a factor to split...
listPubmlst_orgsList Available Organisms in Pubmlst.org Database
listPubmlst_schemesList Available MLST Schemes for a Given Genus
makeblastdbMake a Blast Database
mlstMLST
plot.mlstPlot A mlst Object
processBlastResultProcess Blastn Result
readBlastResultRead Blast Result
iferres/quickMLST documentation built on Dec. 22, 2020, 5:10 p.m.

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