listPubmlst_orgs: List Available Organisms in Pubmlst.org Database

Description Usage Arguments Value Author(s) References

View source: R/pubmlstInterface.R

Description

List all organisms available in pubmlst database.

Usage

1
listPubmlst_orgs(try.times = 3)

Arguments

try.times

integer. Try n times to connect with pubmlst.org before returning an error message.

Value

A list of genus.

Author(s)

Ignacio Ferres

References

Jolley KA, Bray JE, Maiden MCJ. A RESTful application programming interface for the PubMLST molecular typing and genome databases. Database: The Journal of Biological Databases and Curation. 2017;2017:bax060. doi:10.1093/database/bax060.


iferres/quickMLST documentation built on Dec. 22, 2020, 5:10 p.m.