plotGene: Plot splicing ratio boxplot by condition for each exon in a...

In isglobal-brge/rasp: Differential alternative splicing test.

Description

Plot splicing ratio boxplot by condition for each exon in a given gene

Usage

plotGene(
  data,
  gene,
  condition = NULL,
  title = NULL,
  ylab = "exon relative abundance",
  xlab = "Exons"
)

Arguments

data	expression dataset. Must be of class 'RangedSummarizedExperiment'.
condition	a 'factor' representing the condition of each individual.
title	plot title. Optional.
ylab	y-axis label. Optional.
xlab	x-axix label. Optional.

Examples

data(adipose)
plotGene(adipose.chr16, gene="ENSG00000197165.10", condition="inv16p11.2")

isglobal-brge/rasp documentation built on July 12, 2020, 1:17 a.m.