plotSplicingRatios: Plot splicing ratios of exon expression stored in a...

In isglobal-brge/rasp: Differential alternative splicing test.

Description

Plot splicing ratios of exon expression stored in a RangeSummarizedExperiment object

Usage

plotSplicingRatios(data, gene, condition, jitterWidth = 0, inds, exons)

Arguments

data	expression dataset. Must be of class 'RangedSummarizedExperiment'.
gene	name of the gene to plot.
condition	a 'factor' representing the condition of each individual.
jitterWidth	amount of graphical jitter to use in the plot.
inds	'character' or 'numeric' vector. Plot only the specified individuals (samples).
exons	'character' or 'numeric' vector. Plot only the specified exons.

Examples

data(adipose)
plotSplicingRatios("ENSG00000003249.13", adipose.chr16, "inv16p11.2")

isglobal-brge/rasp documentation built on July 12, 2020, 1:17 a.m.