Man pages for ismmshimc/cytutils
Cytometry quality control and reproducibility utilities
| calculate2dJsDivergence | Jensen-Shannon divergence between two-dimensional maps. |
| calculateAof | Average Overlap Frequency (AOF). |
| calculateJsDivergence | Calculate the Jensen-Shannon divergence. |
| calculateMultiChannelAof | Calculate Average Overlap Frequency (AOF) for multiple... |
| channelRename | FCS channel renaming. |
| debarcode | Debarcode an FCS file. |
| debarcoderExportDebarcodedFcs | Export debarcoded FCS files. |
| debarcoderImportKey | Import a barcoding key. |
| debarcoderLabelEvents | Label events. |
| debarcoderPlots | Debarcoder diagnostic plots. |
| debarcoderPrepareFcs | Prepare FCS data for debarcoding. |
| debarcoderUnlabelEvents | Unlabel events. |
| generate2dJsDivergenceDataFrame | Jensen-Shannon divergence between multiple two-dimensional... |
| generatePopulationAssignments | Generate population assignments for manually gated data |
| greedyCytometryAof | Greedy search for optimal Average Overlap Frequency (AOF)... |
| importChannelNames | Import channel names and descriptions. |
| renameFcsFileChannels | Rename channels in set of FCS files. |
