channelRename: FCS channel renaming.
In ismmshimc/cytutils: Cytometry quality control and reproducibility utilities
View source: R/channel_rename.R
channelRename R Documentation
FCS channel renaming.
Description
A two-step utility for renaming FCS channel names and descriptions. This is
useful for situations where channels were misnamed across acquisitions (for
example, naming a channel CD8 in one sample and CD8a in another). See the
Readme at "FCS Channel Renaming" for instructions.
Usage
channelRename(path, dup_handling = "message", verbose = TRUE)
Arguments
path
Directory where FCS files are located.
dup_handling
How to handle masses with duplicates name or desc.
Options are "stop", "message", and NULL.
verbose
If TRUE, script will report progress to console.
ismmshimc/cytutils documentation built on Aug. 26, 2022, 2:07 p.m.
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View source: R/channel_rename.R
| channelRename | R Documentation |
FCS channel renaming.
Description
A two-step utility for renaming FCS channel names and descriptions. This is useful for situations where channels were misnamed across acquisitions (for example, naming a channel CD8 in one sample and CD8a in another). See the Readme at "FCS Channel Renaming" for instructions.
Usage
channelRename(path, dup_handling = "message", verbose = TRUE)
Arguments
path |
Directory where FCS files are located. |
dup_handling |
How to handle masses with duplicates name or desc. Options are "stop", "message", and NULL. |
verbose |
If TRUE, script will report progress to console. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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