calculate2dJsDivergence: Jensen-Shannon divergence between two-dimensional maps.
In ismmshimc/cytutils: Cytometry quality control and reproducibility utilities
View source: R/js_divergence.R
calculate2dJsDivergence R Documentation
Jensen-Shannon divergence between two-dimensional maps.
Description
Calculate the Jensen-Shannon (JS) divergence between two two-dimensional maps.
These maps may be generated by a dimensionality reduction (DR) method; however
this is not a requirement.
Usage
calculate2dJsDivergence(x, y, n = 2^8)
Arguments
x, y
Two-dimensional numeric matrices to compare.
n
Number of grid points for KDE.
Value
A numeric for the JS divergence between the maps.
See Also
calculateJsDivergence
ismmshimc/cytutils documentation built on Aug. 26, 2022, 2:07 p.m.
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View source: R/js_divergence.R
| calculate2dJsDivergence | R Documentation |
Jensen-Shannon divergence between two-dimensional maps.
Description
Calculate the Jensen-Shannon (JS) divergence between two two-dimensional maps. These maps may be generated by a dimensionality reduction (DR) method; however this is not a requirement.
Usage
calculate2dJsDivergence(x, y, n = 2^8)
Arguments
x, y |
Two-dimensional numeric matrices to compare. |
n |
Number of grid points for KDE. |
Value
A numeric for the JS divergence between the maps.
See Also
calculateJsDivergence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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