Man pages for jacobkimmel/hmR
Heteromotility Data Analysis
| anova_feature | Perform an ANOVA test for a single feature |
| hello | Hello, World! |
| hmANOVAFeatures | Performs ANOVAs for each feature in 'hm@unscaled.data'... |
| hmCreateCellDataset | Creates a 'CellDataSet' object from a 'heteromotility' object |
| hmGetData | Gets data from a 'heteromotility' object and returns a... |
| hmHClust | Performs hierarchical clustering and sets 'meta.data$clust'... |
| hmMakeObject | Build a 'heteromotility' data object from a data.frame |
| hmPCA | Performs PCA on 'data' in a heteromotility object 'hm' |
| hmPlotFeatureMeans | Plots feature means for each group defined by a categorical... |
| hmPlotPCA | Plots PCA |
| hmPlotPseudotime | Plots monocle pseudotiming |
| hmPlotTSNE | Plots TSNE |
| hmPseudotime | Performs pseudotiming on motility feature data using... |
| hmScaleData | Scales and centers 'raw.data' in a heteromotility object 'hm' |
| hmSubsetData | Retrives a subset of cell data in heteromotility object 'hm' |
| hmTSNE | Performs tSNE on 'pcs' in 'hm' |
| hmTTestFeatures | Performs t-tests for each feature in 'hm@data' between groups... |
| ttest_feature | Perform a t-test for a single feature |
