hmPlotFeatureMeans: Plots feature means for each group defined by a categorical...

Description Usage Arguments Value

View source: R/hm_plot.R

Description

Plots feature means for each group defined by a categorical variable 'class' in 'meta.data'

Usage

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hmPlotFeatureMeans(hm, class = "clust", limited = F, sig_bars = F,
  width = 8, height = 5, save = NULL)

Arguments

hm

: 'heteromtility' data object.

class

: character. class in 'meta.data' to group bars by.

limited

: boolean. use a limited feature set for visualization.

sig_bars

: boolean. plot significance bars. requires 'class'_adj_p_value in '@feat.data'.

width

: float. plot width for saving in inches.

height

: float. plot width for saving in inches.

save

: character. filename for saving.

Value

pl : ggplot2 object.


jacobkimmel/hmR documentation built on Jan. 6, 2020, 12:44 a.m.