makeGlmnetArgs: Make arguments for glmnet.
In jakejh/metapredict: Meta-analysis of gene expression using the elastic net
View source: R/metapredict_predict.R
makeGlmnetArgs R Documentation
Make arguments for glmnet.
Description
Make vectors for foldid and weights to be used for leave-one-study-out
cross-validation with glmnet::glmnet().
Usage
makeGlmnetArgs(metadata, foldidColname = "study", sampleColname = "sample")
Arguments
metadata
data.frame containing a row for each observation.
foldidColname
column to use for grouping observations.
sampleColname
column that contains sample names.
Value
A named list.
foldid
vector of integers
weights
vector of weights, such that each study is weighted equally.
jakejh/metapredict documentation built on Feb. 14, 2023, 7:53 p.m.
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View source: R/metapredict_predict.R
| makeGlmnetArgs | R Documentation |
Make arguments for glmnet.
Description
Make vectors for foldid and weights to be used for leave-one-study-out
cross-validation with glmnet::glmnet().
Usage
makeGlmnetArgs(metadata, foldidColname = "study", sampleColname = "sample")
Arguments
metadata |
|
foldidColname |
column to use for grouping observations. |
sampleColname |
column that contains sample names. |
Value
A named list.
foldid |
vector of integers |
weights |
vector of weights, such that each study is weighted equally. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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