getStudyData: Get the gene expression data for one study.
In jakejh/metapredict: Meta-analysis of gene expression using the elastic net
View source: R/metapredict_process.R
getStudyData R Documentation
Get the gene expression data for one study.
Description
Load the gene expression data for one study, map probes to Entrez Gene IDs,
then normalize and transform the expression values.
Usage
getStudyData(parentFolderPath, studyName, studyDataType, platformInfo)
Arguments
parentFolderPath
Path to the folder that contains the data.
studyName
Name of dataset to load.
studyDataType
Type of data.
platformInfo
Microarray platform.
Value
An ExpressionSet, unless the platform or data type is not
supported, then NA.
jakejh/metapredict documentation built on Feb. 14, 2023, 7:53 p.m.
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View source: R/metapredict_process.R
| getStudyData | R Documentation |
Get the gene expression data for one study.
Description
Load the gene expression data for one study, map probes to Entrez Gene IDs, then normalize and transform the expression values.
Usage
getStudyData(parentFolderPath, studyName, studyDataType, platformInfo)
Arguments
parentFolderPath |
Path to the folder that contains the data. |
studyName |
Name of dataset to load. |
studyDataType |
Type of data. |
platformInfo |
Microarray platform. |
Value
An ExpressionSet, unless the platform or data type is not
supported, then NA.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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