API for jakubkala/QuiPTsim
| Global functions | |
|---|---|
| F1score | Man page |
| QuiPTsimBenchmark | Man page Source code |
| accuracy | Man page |
| add_motifs | Man page Source code |
| aggregate_metrics | Man page Source code |
| aggregate_results | Man page Source code |
| benchmark_summary | Man page Source code |
| build_model | Man page Source code |
| calculate_ngram_prob | Man page Source code |
| calculate_score | Man page Source code |
| calculate_seq_prob | Man page Source code |
| collect_filtering_times | Man page Source code |
| compute_metrics | Man page Source code |
| cosine_similarity | Man page Source code |
| count_ngrams | Man page Source code |
| create_benchmark_data | Man page Source code |
| create_simulation_data | Man page Source code |
| create_simulation_data_set_of_motifs | Man page Source code |
| euclidean_norm | Man page Source code |
| evaluate_filtering_results | Man page Source code |
| evaluate_models | Man page Source code |
| evaluate_selected_kmers | Man page Source code |
| filter_ngrams | Man page Source code |
| filter_nonrankings | Man page Source code |
| filter_nonrankings_exp3 | Man page Source code |
| filter_nonrankings_realdata | Source code |
| filter_rankings | Man page Source code |
| filter_rankings_exp3 | Man page Source code |
| filter_rankings_realdata | Source code |
| generate_motifs | Man page Source code |
| generate_probs | Man page Source code |
| generate_sequences | Man page Source code |
| generate_set_of_motifs | Source code |
| generate_single_motif | Man page Source code |
| kmers_for_nonranking_methods | Man page Source code |
| parse_results | Man page Source code |
| positive_ngrams | Man page Source code |
| precision | Man page |
| rbind_ngram_matrices | Man page Source code |
| rbind_ngrams | Man page Source code |
| read_ngram_matrix | Man page Source code |
| read_simulation_data | Man page Source code |
| recall | Man page |
| sensitivity | Man page |
| sequenceTransitionMatrix | Man page Source code |
| simulate_sequences | Man page Source code |
| simulate_single_sequence | Man page Source code |
| specificity | Man page |
| subset_matrix | Man page Source code |
| validate_motifs | Man page Source code |
