filter_rankings_exp3: function creates and evaluates filtering rankings

Description Usage Arguments

View source: R/benchmark_ranking.R

Description

function creates and evaluates filtering rankings

Usage

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filter_rankings_exp3(
  paths,
  num_reps,
  num_matrices_to_rbind,
  output_prefix,
  feature_selection_method,
  n,
  fraction,
  validation_scheme
)

Arguments

paths

list of paths containing n-gram matrices

num_reps

number of repetitions of an experiment

num_matrices_to_rbind

number of matrices to bind in order to perform exp III correctly

output_prefix

output files directory

feature_selection_method

filter (e.g. QuiPT)

n

number of total sequences

fraction

fraction of positive examples

validation_scheme

list with ranking details


jakubkala/QuiPTsim documentation built on Jan. 17, 2022, 11:27 p.m.