downsample_genomic_matrix: Rescale positive and negative data, preserving sign...
In jamesdalg/HiCNV: A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization
Description
Arguments
Value
Examples
Description
Downsamples a matrix by a specified factor.
Arguments
whole_matrix
A matrix to be downsampled, on a single chromosome
downsamplefactor
A factor by which to reduce the matrix. Must be something that both the row and columns can be divisible by.
singlechromosome
Single chromosome mode; Multi-chromosome not yet implemented (leave T)
Value
whole_matrix_dsamp A downsampled matrix.
Examples
1
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3
load(system.file("extdata","nbl_result_matrix_sign_small.rda",package = "HiCNV"))
downsample_genomic_matrix(whole_matrix=nbl_result_matrix_sign_small,
downsamplefactor=5,singlechromosome=TRUE)
jamesdalg/HiCNV documentation built on May 9, 2019, 5:05 a.m.
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Description Arguments Value Examples
Description
Downsamples a matrix by a specified factor.
Arguments
whole_matrix |
A matrix to be downsampled, on a single chromosome |
downsamplefactor |
A factor by which to reduce the matrix. Must be something that both the row and columns can be divisible by. |
singlechromosome |
Single chromosome mode; Multi-chromosome not yet implemented (leave T) |
Value
whole_matrix_dsamp A downsampled matrix.
Examples
1 2 3 | load(system.file("extdata","nbl_result_matrix_sign_small.rda",package = "HiCNV"))
downsample_genomic_matrix(whole_matrix=nbl_result_matrix_sign_small,
downsamplefactor=5,singlechromosome=TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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