annotate_1000g: Annotate 1000 Genomes Variant VCF using ClinVar

Description Usage Arguments Examples

Description

This function takes a merged ClinVar-sequencing dataset and returns an ancestry-stratified plot of allele frequencies.

Usage

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Arguments

vcf

data.frame; clinvaR-processed vcf containing 1000 genomes sequencing data. Defaults to importing data from all downloads: vcf <- import_file_1000g().

clinvar

data.frame; clinvaR-processed vcf containing ClinVar data. Defaults to get_clinvar().

Examples

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jamesdiao/clinvaR documentation built on May 18, 2019, 11:19 a.m.